• Alacrinella limnoriae Manier & Ormières ex Manier, 1968
• Alacrinella sanjuanensis Hibbits, 1979
• Amoebidium australiense Lichtw. & M.C. Williams, 1992
• Amoebidium colluviei Lichtw., 1998
• Amoebidium fasciculatum J.L. Licht., 1917 accepted as Amoebidium parasiticum Cienkowski, 1861
• Amoebidium parasiticum Cienkowski, 1861
• Amoebidium poissonii Duboscq, L. Léger & Tuzet, 1948 accepted as Amoebidium parasiticum Cienkowski, 1861
• Amoebidium recticola Chatton, 1906
• Arundinella capitata L. Léger & Duboscq, 1905 accepted as Arundinula capitata (L. Léger & Duboscq) L. Léger & Duboscq, 1906
• Arundinula abyssicola Van Dover & Lichtw., 1986
• Arundinula capitata (L. Léger & Duboscq) L. Léger & Duboscq, 1906
• Arundinula galatheae Manier & Ormières ex Manier, 1968
• Arundinula hapalogaster Hibbits, 1979
• Arundinula incurvata (L. Léger & Duboscq) L. Léger & Duboscq, 1906
• Arundinula orconectis Lichtw., 1962
• Arundinula washingtoniensis Hibbits, 1979
• Astreptonema corophii (Manier) Manier ex Manier, 1968
• Astreptonema gammari (L. Léger & Duboscq) Manier ex Manier, 1970
• Astreptonema longisporum Hauptfl., 1895
• Astreptonema pacificum Hibbits, 1979
• Astreptonema typicum Manier ex Manier, 1968
• Capillus intestinalis Granata, 1909 accepted as Enterobryus intestinalis (Granata) L. Léger & Duboscq, 1929
• Dermocystidium daphniae Jírovec, 1939 accepted as Lymphocystidium daphniae (Jírovec) Weiser, 1943
• Dermocystidium marinum (Machin, H.M. Owen & Collier, 1950) accepted as Perkinsus marinus (Mackin, Owen & Collier) Levine, 1978
• Eccrina flexilis L. Léger & Duboscq, 1906 accepted as Eccrinidus flexilis (L. Léger & Duboscq) Manier, 1970
• Eccrina moniliformis Leidy, 1852 accepted as Enterobryus moniliformis (Leidy) Lichtw., 1957
• Eccrinella corophii Manier, 1961 accepted as Astreptonema corophii (Manier) Manier ex Manier, 1968
• Eccrinella gammari L. Léger & Duboscq, 1906 accepted as Astreptonema gammari (L. Léger & Duboscq) Manier ex Manier, 1970
• Eccrinidus flexilis (L. Léger & Duboscq) Manier, 1970
• Eccrinoides broelemannii L. Léger & Duboscq, 1929
• Eccrinoides helleriae Manier ex Lichtw., 1984
• Eccrinoides henneguyi L. Léger & Duboscq, 1929
• Eccrinoides monticolae (R. Poiss.) Manier, 1970
• Eccrinopsis attenuata (Leidy) L. Léger & Duboscq, 1916 accepted as Enterobryus attenuatus Leidy, 1850
• Eccrinopsis helleriae L. Léger & Duboscq, 1906 accepted as Eccrinoides helleriae Manier ex Lichtw., 1984
• Eccrinopsis hydrophilorum L. Léger & Duboscq, 1916 accepted as Enterobryus hydrophilorum (L. Léger & Duboscq) Manier, 1970
• Eccrinopsis mercieri R. Poiss., 1928 accepted as Parataeniella mercieri (R. Poiss.) R. Poiss., 1929
• Eccrinopsis monticolae R. Poiss., 1931 accepted as Eccrinoides monticolae (R. Poiss.) Manier, 1970
• Enterobryus adjanohounii Manier, Gasc & Bouix, 1975
• Enterobryus ahlesii Lichtw., 1960
• Enterobryus apheloriae Lichtw., 1954
• Enterobryus attenuatus Leidy, 1850
• Enterobryus bifurcatus Whisler, 1963
• Enterobryus borariae Lichtw., 1958
• Enterobryus centroboli G.J.M. Gorter, 1993
• Enterobryus chaleponci G.J.M. Gorter, 1993
• Enterobryus cherokiae Lichtw., 1960
• Enterobryus cingaloboli C. Rajagop., 1967
• Enterobryus compressus Thaxt., 1920
• Enterobryus cylindroiuli Manier ex Manier, 1969
• Enterobryus dixidesmi Lichtw., 1960
• Enterobryus elegans Leidy, 1850
• Enterobryus euryuri Lichtw., 1954
• Enterobryus halophilus Cronin & T.W. Johnson, 1958
• Enterobryus hydrophilorum (L. Léger & Duboscq) Manier, 1970
• Enterobryus intestinalis (Granata) L. Léger & Duboscq, 1929
• Enterobryus isoporostrepti Manier, Gasc & Bouix, 1975
• Enterobryus leptoiuli Manier ex Manier, 1970
• Enterobryus moniliformis (Leidy) Lichtw., 1957
• Enterobryus onychostrepti Manier, Gasc & Bouix, 1975
• Enterobryus oxidi Lichtw., 1960
• Enterobryus oxydesmi Manier, Gasc & Bouix, 1975
• Enterobryus peridontopygei Manier, Gasc & Bouix, 1975
• Enterobryus tuzetae Manier, Gasc & Bouix, 1972
• Enterobryus zinophorae G.J.M. Gorter, 1993
• Enteromyces callianassae Lichtw., 1961
• Enteropogon sexuale Hibbits, 1979
• Lajassiella aphodii Tuzet & Manier ex Manier, 1968
• Leidyomyces attenuatus (Leidy) Lichtw., M.M. White, Cafaro & J.K. Misra, 1999
• Palavascia beaufortae Lichtw. ex Lichtw., 1964 accepted as Palavascia sphaeromatis Tuzet & Manier ex Manier, 1968
• Palavascia beaufortae Lichtw., 1961 accepted as Palavascia sphaeromatis Tuzet & Manier ex Manier, 1968
• Palavascia patagonica Cafaro, 2000
• Palavascia philosciae Tuzet & Manier ex Lichtw., 1964
• Palavascia sphaeromatis Tuzet & Manier ex Manier, 1968
• Paramacrinella microdeutopi Manier & Grizel, 1971
• Paramoebidium bibrachium M.C. Williams & Lichtw., 1990
• Paramoebidium chattonii L. Léger & Duboscq, 1948
• Paramoebidium corpulentum Lichtw. & M.C. Williams, 1991
• Paramoebidium curvum Lichtw., 1979
• Paramoebidium digitoideum Ferrington, Lichtw. & López-Lastra, 1999
• Paramoebidium grande Lichtw. & Arenas, 1996
• Paramoebidium inflexum L. Léger & Duboscq, 1929
• Paramoebidium papillatum Lichtw. & M.C. Williams, 1992
• Parataeniella armadillidii Lichtw. & A.W. Chen, 1964
• Parataeniella binucleata R. Poiss., 1929 accepted as Parataeniella dilatata R. Poiss., 1929
• Parataeniella dilatata R. Poiss., 1929
• Parataeniella intermedia R. Poiss., 1929 accepted as Parataeniella dilatata R. Poiss., 1929
• Parataeniella latrobi M.C. Williams & Lichtw., 1990
• Parataeniella mercieri (R. Poiss.) R. Poiss., 1929
• Parataeniella scotonisci Manier ex Manier, 1970
• Passalomyces compressus (Thaxt.) Lichtw., M.M. White, Cafaro & J.K. Misra, 1999
• Ramacrinella raibautii Manier & Ormières ex Manier, 1968
• Sphaeroforma arctica Jøstensen, Sperstad, Johansen & Landfald, 2002
• Taeniella carcini L. Léger & Duboscq, 1911
• Taeniella galatheae Manier & Ormières ex Manier, 1968 accepted as Taeniella carcini L. Léger & Duboscq, 1911
• Taeniella galatheae Manier & Ormières, 1962 accepted as Taeniella carcini L. Léger & Duboscq, 1911
• Taeniella grandis Hibbits, 1979 accepted as Taeniella carcini L. Léger & Duboscq, 1911
• Taeniella longa L. Léger & Duboscq, 1911 accepted as Taeniella carcini L. Léger & Duboscq, 1911
• Taeniellopsis flexilis R. Poiss., 1929
• Taeniellopsis orchestiae R. Poiss., 1927